All Depositions

Deposition

TARDIS membrane predictions

  • Deposition ID:CZCDP-10301

Release Date: 2024-02-20

Last Modified: 2024-02-20

key visualization for TARDIS membrane predictions

Deposition Overview

Voxel-based and instance segmentations of membranes predicted using TARDIS.

Authors

Robert Kiewisz, Tristan Bepler

Datasets with Deposition Data

Annotations:12,969

Related Databases

Not Submitted

Annotation Methods Summary

Method Type

Automated

Method Links

Datasets with Deposition Data

295 of 295 Datasets

Dataset Name

Organism

Runs

With deposition data

Annotations

Deposition only

Annotated Objects

Deposition only

key visualization for Sulfolobus solfac.P2+STIV 24 hour Post infection

Sulfolobus solfac.P2+STIV 24 hour Post infection

Dataset ID: DS-10114

Rasika Ramdasi, Grant Jensen

Sulfolobus solfataricus

21

21
  • membrane
key visualization for Severe acute respiratory syndrome coronavirus 2

Severe acute respiratory syndrome coronavirus 2

Dataset ID: DS-10006

Zunlong Ke, Joaquin Oton, Kun Qu, ... , John Briggs

Severe acute respiratory syndrome coronavirus 2

156

156
  • membrane
  • SARS-CoV2 spike protein
key visualization for HUVECs-pNLGFP-VPS4DN

HUVECs-pNLGFP-VPS4DN

Dataset ID: DS-10186

Cora Woodward, Grant Jensen

Homo sapiens

22

22
  • membrane
key visualization for Hpylori_dFliF_FISE

Hpylori_dFliF_FISE

Dataset ID: DS-10048

Mohammed Kaplan, Grant Jensen

Helicobacter pylori

427

427
  • membrane
key visualization for H.pylori 26695 delta-cagH / AGS

H.pylori 26695 delta-cagH / AGS

Dataset ID: DS-10152

Yi-Wei Chang, Grant Jensen

Helicobacter pylori

72

72
  • membrane
key visualization for 70S ribosome with chloramphenicol

70S ribosome with chloramphenicol

Dataset ID: DS-10003

Tegunov Dimitry, Xue Liang, ... , Cramer Patrick, Julia Mahamid

Mycoplasma pneumoniae

65

65
  • cytosolic ribosome
  • membrane
key visualization for Microtubule doublet from mouse sperm

Microtubule doublet from mouse sperm

Dataset ID: DS-10005

Zhen Chen, ... , Ronald D. Vale, David A. Agard

Mus musculus

39

39
  • membrane
  • microtubule doublet 48 nm repeat
  • microtubule doublet 96 nm repeat
key visualization for T. primitia proteinase K

T. primitia proteinase K

Dataset ID: DS-10252

Elitza Tocheva, Grant Jensen

Treponema primitia

18

18
  • membrane
key visualization for G. hansenii gh7-3

G. hansenii gh7-3

Dataset ID: DS-10033

William Nicolas, Grant Jensen

Gluconacetobacter hansenii

6

6
  • membrane
key visualization for L. pneumophila JV7967

L. pneumophila JV7967

Dataset ID: DS-10080

Debnath Ghosal, Grant Jensen

Legionella pneumophila

70

70
  • membrane
key visualization for G. hansenii wn16-4

G. hansenii wn16-4

Dataset ID: DS-10036

William Nicolas, Grant Jensen

Gluconacetobacter hansenii

8

8
  • membrane
key visualization for G. hansenii gh7-2

G. hansenii gh7-2

Dataset ID: DS-10032

William Nicolas, Grant Jensen

Gluconacetobacter hansenii

4

4
  • membrane
key visualization for M. pneumoniae MP PrkC 27.5KX

M. pneumoniae MP PrkC 27.5KX

Dataset ID: DS-10296

Jian Shi, Grant Jensen

Mycoplasma pneumoniae

62

62
  • membrane
key visualization for Hyphomonas

Hyphomonas

Dataset ID: DS-10162

Yi-Wei Chang, Grant Jensen

Hyphomonas neptunium

1

1
  • membrane
key visualization for E. coli pLE7_1mM_IPTG

E. coli pLE7_1mM_IPTG

Dataset ID: DS-10193

Matt Swulius, Grant Jensen

Escherichia coli

15

15
  • membrane
key visualization for G. hansenii gh6-3

G. hansenii gh6-3

Dataset ID: DS-10031

William Nicolas, Grant Jensen

Gluconacetobacter hansenii

1

1
  • membrane
key visualization for Campy flhBc cells

Campy flhBc cells

Dataset ID: DS-10209

Morgan Beeby, Grant Jensen

Campylobacter jejuni

18

18
  • membrane
key visualization for Pseudomonas aeruginosa

Pseudomonas aeruginosa

Dataset ID: DS-10040

Mohammed Kaplan, Grant Jensen

Pseudomonas aeruginosa

125

125
  • membrane
key visualization for L. pneumophila JV9082

L. pneumophila JV9082

Dataset ID: DS-10081

Debnath Ghosal, Grant Jensen

Legionella pneumophila

61

61
  • membrane
key visualization for Bsubtilis_ponA_sacculi

Bsubtilis_ponA_sacculi

Dataset ID: DS-10246

Elitza Tocheva, Grant Jensen

Bacillus subtilis

9

9
  • membrane
  • 1
  • 2
  • 3
  • 4
  • 5
  • 15