CZII - CryoET Object Identification Challenge - Experimental Training Data

  • Dataset ID:DS-10440

Release Date: 2024-10-30

Last Modified: 2024-10-30

key visualization for CZII - CryoET Object Identification Challenge - Experimental Training Data

Dataset Overview

This dataset is comprised of movie stacks, tiltseries, alignments, tomograms and hand-curated ground truth annotations for the purpose of training object identification algorithms in the context of the CryoET Object Identification Challenge. The data was acquired on a Krios G4 using a Falcon 4i detector and SelctrisX energy filter. Tomograms were reconstructed using AreTomo3 v1.0.23 and post-processed using different methods. Each run provides raw, denoised, missing wedge corrected and ctf corrected tomograms. The labels were curated as described in the accompanying paper and include point labels for Apo-ferritin, Beta-amylase, Beta-galactosidase, cytosolic ribosomes, thyroglobulin and VLP.

Authors

Ariana Peck, Yue Yu, Jonathan Schwartz, Anchi Cheng, Utz Heinrich Ermel, Saugat Kandel, Dari Kimanius, Elizabeth Montabana, Daniel Serwas, Hannah Siems, Zhuowen Zhao, Shawn Zheng, Matthias Haury, David Agard, Clinton Potter, Bridget Carragher, Kyle I. S. Harrington, Mohammadreza Paraan

Related Databases

Runs

7 of 7 Runs

Run Name

Tilt Series Quality Score

Annotated Objects

key visualization for TS_5_4
TS_5_4

Run ID: RN-16463

5 - Excellent
  • Beta-amylase
  • Beta-galactosidase
  • cytosolic ribosome
  • 3 More Objects
key visualization for TS_6_6
TS_6_6

Run ID: RN-16466

5 - Excellent
  • Beta-amylase
  • Beta-galactosidase
  • cytosolic ribosome
  • 3 More Objects
key visualization for TS_73_6
TS_73_6

Run ID: RN-16467

5 - Excellent
  • Beta-amylase
  • Beta-galactosidase
  • cytosolic ribosome
  • 3 More Objects
key visualization for TS_99_9
TS_99_9

Run ID: RN-16469

5 - Excellent
  • Beta-amylase
  • Beta-galactosidase
  • cytosolic ribosome
  • 3 More Objects
key visualization for TS_6_4
TS_6_4

Run ID: RN-16465

5 - Excellent
  • Beta-amylase
  • Beta-galactosidase
  • cytosolic ribosome
  • 3 More Objects
key visualization for TS_86_3
TS_86_3

Run ID: RN-16468

5 - Excellent
  • Beta-amylase
  • Beta-galactosidase
  • cytosolic ribosome
  • 3 More Objects
key visualization for TS_69_2
TS_69_2

Run ID: RN-16464

5 - Excellent
  • Beta-amylase
  • Beta-galactosidase
  • cytosolic ribosome
  • 3 More Objects