Dataset
CZII - CryoET Object Identification Challenge - Experimental Training Data
- Dataset ID:DS-10440
Release Date: 2024-10-30
Last Modified: 2024-10-30
Dataset Overview
This dataset is comprised of movie stacks, tiltseries, alignments, tomograms and hand-curated ground truth annotations for the purpose of training object identification algorithms in the context of the CryoET Object Identification Challenge. The data was acquired on a Krios G4 using a Falcon 4i detector and SelctrisX energy filter. Tomograms were reconstructed using AreTomo3 v1.0.23 and post-processed using different methods. Each run provides raw, denoised, missing wedge corrected and ctf corrected tomograms. The labels were curated as described in the accompanying paper and include point labels for Apo-ferritin, Beta-amylase, Beta-galactosidase, cytosolic ribosomes, thyroglobulin and VLP.
Authors
Ariana Peck, Yue Yu, Jonathan Schwartz, Anchi Cheng, Utz Heinrich Ermel, Saugat Kandel, Dari Kimanius, Elizabeth Montabana, Daniel Serwas, Hannah Siems, Zhuowen Zhao, Shawn Zheng, Matthias Haury, David Agard, Clinton Potter, Bridget Carragher, Kyle I. S. Harrington, Mohammadreza Paraan
Publications
Related Databases
EMDB ID:EMD-41923
Runs
7 of 7 Runs
Run Name | Tilt Series Quality Score | Annotated Objects | ||
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TS_5_4 Run ID: RN-16463 | 5 - Excellent |
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TS_6_6 Run ID: RN-16466 | 5 - Excellent |
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TS_73_6 Run ID: RN-16467 | 5 - Excellent |
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TS_99_9 Run ID: RN-16469 | 5 - Excellent |
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TS_6_4 Run ID: RN-16465 | 5 - Excellent |
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TS_86_3 Run ID: RN-16468 | 5 - Excellent |
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TS_69_2 Run ID: RN-16464 | 5 - Excellent |
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